dadaist2-addTaxToFasta

dadaist2-addTaxToFasta - Add taxonomy annotation to the FASTA file with the representative sequences

Author

Andrea Telatin andrea.telatin@quadram.ac.uk

Usage

dadaist2-assigntax -i FASTA -o DIR -r REFERENCE [-t THREADS]

• -f, –fasta FASTA

  Input file in FASTA format (or in DADA2 table format)

• -o, –output FASTA

  Output file in FASTA format. If not provided will be printed to the standard output.

• -t, –taxonomy FILE

  "taxonomy.tsv" file as produced by dadaist2-assigntax

Source code and documentation

The program is freely available at https://quadram-institute-bioscience.github.io/dadaist2 released under the MIT licence. The website contains further DOCUMENTATION.