Dadaist2

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        If you use plots from MultiQC in a publication or presentation, please cite:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

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        About MultiQC

        This report was generated using MultiQC, version 1.10

        You can see a YouTube video describing how to use MultiQC reports here: https://youtu.be/qPbIlO_KWN0

        For more information about MultiQC, including other videos and extensive documentation, please visit http://multiqc.info

        You can report bugs, suggest improvements and find the source code for MultiQC on GitHub: https://github.com/ewels/MultiQC

        MultiQC is published in Bioinformatics:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

        Dadaist2

        MultiQC report generated from the Dadaist2 pipeline

        Report generated on 2021-04-16, 21:47 based on data in: /Users/telatina/git/dadaist2/output/subsample-silva-default/qc

        Quality Checks

        QC

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        Octaveplot

        Aboundance distribution of sequences per sample. Sequences are binned by their log2 counts for each sample. See https://doi.org/10.1101/389833

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        Most common sequences

        Most common sequences (with taxonomy)

        >ASV10 counts: 2017 ratio: 2.3% taxonomy: Bacteria-Bacteroidota-Bacteroidia-Bacteroidales-Muribaculaceae-NA
        TCCGGATTTATTGGGTTTAAAGGGTGCGTAGGCGGCCTGCCAAGTCAGCGGTAAAATTGCGGGGCTCAACCCCGTACAGCCGTTGAAACTGCCGGGCTCGAGTGGGCGAGAAGTATGCGGAATGCGTGGTGTAGCGGTGAAATGCATAGATATCACGCAGAACCCCGATTGCGAAGGCAGCATACCGGCGCCCGACTGACGCTGAGGCACGA
        >ASV100 counts: 92 ratio: 0.1% taxonomy: Bacteria-Firmicutes-Clostridia-Lachnospirales-Lachnospiraceae-NA
        TCCGGAATTACTGGGTGTAAAGGGAGCGTAGACGGCAATGCAAGTCCGGAGTGGAATGCGGCAGCTCAACTGCCGAACTGCTCTGGAAACTGTATGGCTTGAGTGCAGGAGGGGTAAGCGGAATTCCTGGTGTAGCGGTGAAATGCGTAGATATCAGGAGGAACACCGGTGGCGAAGGCGGCTTACTGGACTGTAACTGACGTTGAGGCTCGA
        >ASV101 counts: 90 ratio: 0.1% taxonomy: Bacteria-Firmicutes-Clostridia-Clostridia_UCG-014-NA-NA
        TCCGGAATTATTGGGTGTAAAGGGTGCGTAGACGGGATAACAAGTTGGTTGTGAAACCCCTCGGCTCAACTGAGGAACTGCAACCAAAACTATTATTCTTGAGTGCAGGAGAGGAAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAAGAACACCGGTGGCGAAGGCGACTTTCTGGACTGTAACTGACGTTGAGGCACGA

        Most common sequences (unclassified)

        >ASV1 counts: 7020 ratio: 8.1% taxonomy: Bacteria-Bacteroidota-Bacteroidia-Bacteroidales-Muribaculaceae-NA
        TCCGGATTTATTGGGTTTAAAGGGTGCGTAGGCGGGCTTTTAAGTCAGCGGTAAAAATTCGGGGCTCAACCCCGTCCGGCCGTTGAAACTGGGGGCCTTGAGTGGGCGAGAAGAAGGCGGAATGCGTGGTGTAGCGGTGAAATGCATAGATATCACGCAGAACCCCGATTGCGAAGGCAGCCTTCCGGCGCCCTACTGACGCTGAGGCACGA
        >ASV2 counts: 6846 ratio: 7.9% taxonomy: Bacteria-Bacteroidota-Bacteroidia-Bacteroidales-Muribaculaceae-NA
        TCCGGATTTATTGGGTTTAAAGGGTGCGCAGGCGGACTCTCAAGTCAGCGGTCAAATCGCGGGGCTCAACCCCGTTCCGCCGTTGAAACTGGGAGCCTTGAGTGCGCGAGAAGTAGGCGGAATGCGTGGTGTAGCGGTGAAATGCATAGATATCACGCAGAACTCCGATTGCGAAGGCAGCCTACCGGCGCGCAACTGACGCTCATGCACGA
        >ASV3 counts: 6831 ratio: 7.9% taxonomy: Bacteria-Bacteroidota-Bacteroidia-Bacteroidales-Muribaculaceae-NA
        TCCGGATTTATTGGGTTTAAAGGGTGCGCAGGCGGAAGATCAAGTCAGCGGTAAAATTGAGAGGCTCAACCTCTTCGAGCCGTTGAAACTGGTTTTCTTGAGTGAGCGAGAAGTATGCGGAATGCGTGGTGTAGCGGTGAAATGCATAGATATCACGCAGAACTCCGATTGCGAAGGCAGCATACCGGCGCTCAACTGACGCTCATGCACGA

        Samples

        Braycurtis

        Bray-Curtis dissimilarity between samples

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        Taxa

           
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        MultiQC v1.10 - Written by Phil Ewels, available on GitHub.

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